BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020D09SP1|AL427621
(965 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1244 1836 0.0
>3x_Contig1244
Length = 4689
Score = 1836 bits (921), Expect = 0.0
Identities = 955/968 (98%), Gaps = 3/968 (0%)
Strand = Plus / Plus
Query: 1 tagcacgnctccatcttcaacttcttcctttagctcttcttcatcttcgctgtgattaat 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2212 tagcacgtctccatcttcaacttcttcctttagctcttcttcatcttcgctgtgattaat 2271
Query: 61 tgaaccattgtcgtcatcactgaaatcgttctccgaatcccagtcgtttctcactttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2272 tgaaccattgtcgtcatcactgaaatcgttctccgaatcccagtcgtttctcactttctt 2331
Query: 121 ttgttgtagcttgaaccttctgacatctgcagaaacatcgataccttgtagatcctgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2332 ttgttgtagcttgaaccttctgacatctgcagaaacatcgataccttgtagatcctgcaa 2391
Query: 181 ttttccgatgtcatcgaactgtgccatttcctgtttatratgttcttcttcgaagttgtc 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2392 ttttccgatgtcatcgaactgtgccatttcctgtttataatgttcttcttcgaagttgtc 2451
Query: 241 tagatcttgcatatcccattcatcaaattcatcttcaaattcatctgcaccatcggcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2452 tagatcttgcatatcccattcatcaaattcatcttcaaattcatctgcaccatcggcttt 2511
Query: 301 accactacccaacaactcggcgaaaatatcatcatcgtcttcatctaaaccctcagcagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2512 accactacccaacaactcggcgaaaatatcatcatcgtcttcatctaaaccctcagcagc 2571
Query: 361 gttgttactcttaggcttgatttcgacagcracatcctcattgataacgtatgcrtcgtc 420
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 2572 gttgttactcttaggcttgatttcgacagcaacatcctcattgataacgtatgcatcgtc 2631
Query: 421 ttctaatgccaccaagacttccctcaaggcaggattcatatcaggcttgaaccccacaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2632 ttctaatgccaccaagacttccctcaaggcaggattcatatcaggcttgaaccccacaag 2691
Query: 481 ttctcccggaatctcttgcatttgatccaaatattcttgcttggcaacacctctcacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2692 ttctcccggaatctcttgcatttgatccaaatattcttgcttggcaacacctctcacaaa 2751
Query: 541 caacggctcagcagcsttgttctccagatcttgakagcktggctccacaaacagagattc 600
||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 2752 caacggctcagcagccttgttctccagatcttgatagcttggctccacaaacagagattc 2811
Query: 601 tggatccttcaacttcttcttctcaataggcttcttactcttggcaggaatgaraacgga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2812 tggatccttcaacttcttcttctcaataggcttcttactcttggcaggaatgaaaacgga 2871
Query: 661 atgggatgggtctaagccaataggtttcaaatgctgtgtataatcgtatttggaatcgtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2872 atgggatgggtctaagccaataggtttcaaatgctgtgtataatcgtatttggaatcgtc 2931
Query: 721 aaatgtaataccatatagagctgcttcaccgacgtgttcattaacagcatttttagaagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2932 aaatgtaataccatatagagctgcttcaccgacgtgttcattaacagcatttttagaagc 2991
Query: 781 tgatgtgcttggtgcagttggtgtagagacaagtttcggaattggcccatcttctgaact 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2992 tgatgtgcttggtgcagttggtgtagagacaagtttcggaattggcccatcttctgaact 3051
Query: 841 ctgtgagacatccttctttttatgacgattctgaacagg-accagaacatgttcacctgc 899
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 3052 ctgtgagacatccttctttttatgacgattctgaacaggaacaagaacatgttcacctgc 3111
Query: 900 ctcgggatcatgataattaggat-mtcgtgtggtctatgca-cacagcaaacttcgtcgc 957
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 3112 ctcgggatcatgataattaggatcatcgtgtggtctatgcaccacagcaaacttcgtcgc 3171
Query: 958 gttgttct 965
||||||||
Sbjct: 3172 gttgttct 3179
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8253
Number of Sequences: 1807
Number of extensions: 8253
Number of successful extensions: 95
Number of sequences better than 1.0e-20: 1
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)